In the 'Scoring Points' section it says that +3 points will be awarded to the Skysports.com man of the match.

However, looking at the player data no man of the match points appear to have been awarded yet for any of the players and there is no column for it.

Anyone know how this works?

I think they have. I had a look at the scores for the Germany players and Muller has scored 11.

I think that's :-

1 point for playing
4 for the goal
3 for the assist
3 for MOTM

I haven't looked at any of the other teams though

I have 2 MOM in my team (Donovan and Godin) which both got 3 pts each.

In the team under MOM column it has 1, but the total is 7 for Donovan: 3 pts for MOM, 3 pts for assist and 1 for appearance.

Hopefully Van Persie gets MOM (and an assist although I doubt it)